Metabarcoding Forest Insect Gut Contents

Closed Pre-Solicitation Posted

Solicitation number
1157030
Agency
Responses due
Set-aside
No set-aside

Opportunity facts

Place of performance
Athens, Georgia 30602, United States

Notice details come from SAM.gov. Updated .

About this opportunity

The USDA Forest Service is seeking professional scientific services to perform targeted amplicon sequencing of DNA extracted from native bee species and Asian needle ants through a metabarcoding analysis project. The procurement aims to support two critical research studies: determining which tree species serve as the most important pollen sources for native bees based on gut contents analysis, and revealing the diet breadth of the invasive Asian needle ant suspected of contributing to declining bee populations. Technical requirements include five specific tasks beginning with DNA extracts provided by the government: adding Illumina amplicons, cleaning up PCR product, conducting library pooling, performing pre-sequencing quality control, and proceeding with Illumina NextSeq2000 2x300bp flow cell sequencing. This sources sought notice is issued solely for market research and planning purposes under NAICS code 541690 Other Scientific and Technical Consulting Services. Interested parties must submit responses by August 14, 2025, to Heather Harkley at heather.harkley@usda.gov with detailed information about their firm's capabilities, experience, and commercial availability.

This opportunity does not include any set-aside designations and is open to all qualified contractors. No incumbent contractors or current service providers are identified in the documentation. The notice does not specify award values, budget ranges, or funding amounts available for this potential procurement. The work must be completed within six months of receiving the DNA extracts from the government, with Dr. Walter Lorenz from the Georgia Genomics and Bioinformatics Core serving as key personnel to oversee the sequencing work. The resulting sequencing data will be analyzed by Forest Service researchers and used for publication in peer-reviewed scientific journals. No travel requirements are associated with this contract, and all work will be performed to support USDA Southern Research Station RWU4552 located in Athens, Georgia.

Notice text

THIS IS A Sources Sought Notice ONLY.
The U.S. Government desires to procure the professional services to collect samples from two studies will be processed. These studies aim to 1) determine which tree species are the most important sources of pollen to native bees based on gut contents, and 2) reveal the diet breadth of the Asian needle ant, an invasive species suspected of contributing to declining bee populations.

Project. Metabarcoding Forest Insect Gut Contents.
Scope. USDA Southern Research Station RWU4552, Athens, GA 30602-2044 requires Scientific Support services to Targeted amplicon sequencing of DNA extracted from the guts of native bee species and the Asian needle ant.
Objective. To better understand the resource requirements of native pollinators (i.e., which tree species represent important sources of pollen in forests) as well as the ecological impacts of the invasive Asian needle ant, amplicon sequencing is needed to determine what these insects have been ingesting.
Technical Requirements. Beginning with DNA extracts, the contractor will 1) add Illumina amplicons, 2) clean up PCR product, 3) conduct library pooling, 4) perform pre-sequencing QC, 5) proceed with Illumina NextSeq2000 2x300bp flow cell (P1).

This notice is issued solely for information and planning purposes – it does not constitute a Request for Quote (RFQ)/Invitation for Bid (IFB)/Request for Proposal (RFP) or a promise to issue an RFQ, IFB or RFP in the future. This notice does not commit the U.S. Government to contract for any supply or service. Further, the U.S. Government is not seeking quotes, bids or proposals at this time and will not accept unsolicited proposals in response to this sources sought notice. The U.S. Government will not pay for any information or administrative costs incurred in response to this notice. Submittals will not be returned to the responder. Not responding to this notice does not preclude participation in any future RFQ or IFB or RFP, if any is issued.
The anticipated NAICS code is 541690 Other Scientific and Technical Consulting Services.
Submit responses to Heather Harkley, at heather.harkley@usda.gov and courtesy copy to the Contracting Officer Nestor Rivera Gonzalez at nestor.riveragonzalez@usda.gov
Submit response no later than due August 14, 2025.
In response to this source sought, please provide:
1. Name of the firm, point of contact, phone number, email address, UEI number, CAGE code, a statement regarding small business status (including small business type(s)/certifications(s) such as SDB, 8(a), HUBZone, SDVOSB, WOSB, etc.) and the corresponding NAICS code.
2. Identify whether your firm is interested in competing for this requirement as a prime contractor or not. Identify subcontracting, joint ventures or teaming arrangement that will be pursued, if any.
3. Information in sufficient detail regarding previous experience (indicate whether as a prime contractor or subcontractor) on similar requirements (include size, scope, complexity, timeframe, government or commercial), current capabilities, pertinent certifications, etc., that will facilitate making a capability determination.
4. Information to help determine if the services are commercially available, including pricing information, basis for the pricing information (e.g., market pricing, catalog pricing), delivery schedules, customary terms and conditions, warranties, etc.

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