Source Sought Notice Metabarcoding Forest Insect Gut Contents.pdf

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Metabarcoding Forest Insect Gut Contents
Solicitation number
1157030
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This is a Sources Sought notice issued by the USDA Southern Research Station for scientific services related to metabarcoding forest insect gut contents. The government seeks professional services to perform targeted amplicon sequencing of DNA extracted from native bee species and Asian needle ants to support two research studies: determining which tree species are important pollen sources for native bees and revealing the diet breadth of invasive Asian needle ants suspected of contributing to declining bee populations. Reference number 1157030 covers work to be performed for USDA Southern Research Station RWU4552 in Athens, GA.

The technical requirements include five specific tasks beginning with DNA extracts: adding Illumina amplicons, cleaning up PCR product, conducting library pooling, performing pre-sequencing quality control, and proceeding with Illumina NextSeq2000 2x300bp flow cell (P1). The anticipated NAICS code is 541690 Other Scientific and Technical Consulting Services. Responses must be submitted by August 14, 2025, to Heather Harkley at heather.harkley@usda.gov with a courtesy copy to Contracting Officer Nestor Rivera Gonzalez. The notice explicitly states this is for information and planning purposes only and does not constitute a solicitation, with no guarantee of future procurement. Respondents must provide firm information including contact details, UEI number, CAGE code, small business status, interest in prime contracting, relevant experience details, and commercial availability information including pricing.

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SOURCES SOUGHT SYNOPSIS

THIS IS A Sources Sought Notice ONLY.

The U.S. Government desires to procure the professional services to collect samples from two studies will be processed. These studies aim to 1) determine which tree species are the most important sources of pollen to native bees based on gut contents, and 2) reveal the diet breadth of the Asian needle ant, an invasive species suspected of contributing to declining bee populations.

Reference No. 1157030

Project. Metabarcoding Forest Insect Gut Contents.

Scope. USDA Southern Research Station RWU4552, Athens, GA 30602-2044 requires Scientific Support services to Targeted amplicon sequencing of DNA extracted from the guts of native bee species and the Asian needle ant.

Objective. To better understand the resource requirements of native pollinators (i.e., which tree species represent important sources of pollen in forests) as well as the ecological impacts of the invasive Asian needle ant, amplicon sequencing is needed to determine what these insects have been ingesting.

Technical Requirements. Beginning with DNA extracts, the contractor will 1) add Illumina amplicons, 2) clean up PCR product, 3) conduct library pooling, 4) perform pre-sequencing QC,

5) proceed with Illumina NextSeq2000 2x300bp flow cell (P1).

This notice is issued solely for information and planning purposes – it does not constitute a Request for Quote (RFQ)/Invitation for Bid (IFB)/Request for Proposal (RFP) or a promise to issue an RFQ, IFB or RFP in the future. This notice does not commit the U.S. Government to contract for any supply or service. Further, the U.S. Government is not seeking quotes, bids or proposals at this time and will not accept unsolicited proposals in response to this sources sought notice. The U.S. Government will not pay for any information or administrative costs incurred in response to this notice. Submittals will not be returned to the responder. Not responding to this notice does not preclude participation in any future RFQ or IFB or RFP, if any is issued.

The anticipated NAICS code is 541690 Other Scientific and Technical Consulting Services.

Submit responses to Heather Harkley, at heather.harkley@usda.gov and courtesy copy to the Contracting Officer Nestor Rivera Gonzalez at nestor.riveragonzalez@usda.gov Submit response no later than due August 14, 2025.

In response to this source sought, please provide:

1. Name of the firm, point of contact, phone number, email address, UEI number, CAGE code, a statement regarding small business status (including small business type(s)/certifications(s) such as SDB, 8(a), HUBZone, SDVOSB, WOSB, etc.) and the corresponding NAICS code.

mailto:heather.harkley@usda.gov mailto:nestor.riveragonzalez@usda.gov

2. Identify whether your firm is interested in competing for this requirement as a prime contractor or not. Identify subcontracting, joint ventures or teaming arrangement that will be pursued, if any.

3. Information in sufficient detail regarding previous experience (indicate whether as a prime contractor or subcontractor) on similar requirements (include size, scope, complexity, timeframe, government or commercial), current capabilities, pertinent certifications, etc., that will facilitate making a capability determination.

4. Information to help determine if the services are commercially available, including pricing information, basis for the pricing information (e.g., market pricing, catalog pricing), delivery schedules, customary terms and conditions, warranties, etc.

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