The clinical genome resource ? Advancing genomic medicine through biocuration and expert assessment of genes and variants at scale

Active Cooperative Agreement Awarded Last action

Award ID
U24HG009650
Recipient
Awarding agency
Obligated
$70,392,645

Award facts

Assistance listing
93.172 Human Genome Research
Completion date 93% complete
Originally
Funding
  • $65,726,655.10 Federal
  • $4,665,990.00 Non-federal
Place of performance
Chapel Hill, NC 27599, USA

Award details come from USAspending.gov.

Description

Abstract
High-quality evidence about clinically relevant genes and variants is a fundamental cornerstone of genomic medicine. All aspects of clinical care derive from accurate information about the etiology, natural history, and management of disease. With genomic analysis becoming more routine for patient care, the public availability of well-curated and expertly adjudicated knowledge about genes and variants is critical. The clingen resource represents a highly collaborative effort of the genetics community to establish an evidence-based resource for the assessment of the clinical relevance of genes and variants that is readily accessible to (and trusted by) diagnostic laboratories, providers, and patients. Our objective is to improve patient care through enhanced and accelerated curation of the clinical genome using innovative approaches to overcome challenges and address new topics. We will accomplish this objective through the concerted pursuit of the following aims: aggregation of structured evidence regarding genetic conditions and the genes and variants that cause them; application of frameworks for expert curation of clinical validity, variant pathogenicity, and clinical actionability of genetic conditions; broad dissemination of tools, standards, knowledge bases, and assertions about clinically relevant genes and variants; and evaluation of all aspects of this work, so that we can improve the quality and impact of the resource for implementation of transparent, reproducible, and evidence-based genomic medicine. The proposal is innovative in several ways. IT will aggregate data produced by cutting edge technologies, adapt annotation tools to enable crowdsourcing through community curation, and apply advanced natural language processing for annotation so that human curators can function at the top of their skill level. IT will leverage the participation of a large and enthusiastic community of volunteers, thus acting as a force multiplier for the NIH funded teams. IT will engage advocates who can conduct outreach within their areas of specialty, to further extend the reach of clingen products into genomic medicine research and clinical care. IT will transform a wide range of clinical and basic science data into well-structured, transparently referenced expert assertions with documentation of provenance and attention to ensuring the interoperability of the resource with diverse end- users, including electronic health records. The proposed resource project is significant because in its entirety IT will improve, scale, and disseminate the freely available expert curation and interpretation of the human genome to the global genomics community with the goal of improving health care for all people.

Transactions

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Amendment Administrative supplement: the clinical genome resource - advancing genomic medicine through biocuration and expert assessment of genes and variants at scale $71,990 $0
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Amendment Administrative supplement: the clinical genome resource - advancing genomic medicine through biocuration and expert assessment of genes and variants at scale $399,387 $0
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Amendment Administrative supplement: the clinical genome resource - advancing genomic medicine through biocuration and expert assessment of genes and variants at scale $0 $0
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Amendment $4,665,990 $0
Original award $4,665,990 $4,665,990
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Subawards

Subrecipient Amount Awarded
The Medical College Of Wisconsin, Inc. The Clinical Genome Resource will make a fundamental contribution to public health care by providing a centralized, sustainable, and easily accessible source of… $49,717
Geisinger Clinic Geisinger Clinic's responsibilities will include managing the Geisinger budget and coordinating on all study activities, including manuscripts and… $48,329
The Washington University The Washington University research team will provide leadership to the somatic Clinical Domain Working Group (CDWG), guide the efforts of existing Somatic… $239,399
Mayo Clinic The Mayo Clinic research team will participate in activities focusing on the Cardiovascular domain of the project. The team will oversee the various gene and… $338,303
Georgetown University The Georgetown University research team will: 1. Develop informatics processes and tools to automatically extract knowledge derived from the… $687,818
Massachusetts Eye And Ear Infirmary The research team will establish additional Gene curation expert panels for ocular conditions including eye developmental conditions, strabismus and ocular… $318,658
Research Triangle Institute International, LLC The Research Triangle Institute team will provide oversight and scientific leadership of the actionability activities, advise research design decisions and data… $1,053,784
Baylor College Of Medicine Baylor College of Medicine research team will work cooperatively on the project "The Clinical Genome Resource – Advancing genomic medicine through… $319,992
Arup Laboratories Inc. For this project, "The Clinical Genome Resource - Advancing genomic medicine through biocuration and expert assessment of genes and variants at scale, the… $399,994
Kaiser Foundation Hospitals In addition to participating on study design, methods development and production, the research team will be responsible for the Knowledge Synthesis Team (KST)… $3,721,923
University Of Miami The University of Miami research team will work cooperatively on the project, "The Clinical Genome Resource - Advancing genomic medicine through biocuration and… $349,419
Acmg Foundation For Genetic And Genomic Medicine The American College of Medical Genetics and Genomic (ACGM) research team will serve as the Administrative Core with regard to meeting logistics, travel and… $3,106,612
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Quick answers

Who received award U24HG009650?

U24HG009650 was awarded to University Of North Carolina At Chapel Hill by National Human Genome Research Institute (National Institutes of Health) on September 12, 2017.

How much is award U24HG009650 worth?

$70,392,645 has been obligated on U24HG009650: $65,726,655 in federal funding and $4,665,990 in non-federal funding.

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