RFA-HG-27-008-Full-Announcement.html
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- Opportunity number
- RFA-HG-27-008
About this file
This is a Request for Application (RFA) announcement for the Impact of Genomic Variation on Function (IGVF) Data and Coordinating Center (DACC), a cooperative agreement opportunity funded by the National Institutes of Health National Human Genome Research Institute (NHGRI) under Assistance Listing 93.172 (Human Genome Research). The DACC will serve as the coordinating center for the IGVF Consortium, responsible for expanding and developing broadly accessible resources including a data portal and a comprehensive, searchable catalog of measured and predicted variant impacts. The center will seek input from the research community on catalog design, organize and facilitate consortium activities, and identify collaboration opportunities with other programs and consortia. This is a forecasted opportunity with the formal Notice of Funding Opportunity expected to be published in 2025, with application submissions also anticipated in 2025. The U24 activity code will govern the award. Typical time from submission to award for cooperative agreements is approximately nine months.
Eligible applicants include public and private higher education institutions, state and local governments, Indian tribal governments (federally and non-federally recognized), 501(c)(3) nonprofits, for-profit organizations, small businesses, county governments, independent school districts, and public or Indian housing authorities. Clinical trials are not allowed under this mechanism. Non-domestic entities and foreign organizations are not eligible to apply, though unfunded international collaborations and foreign components are permitted. All applications must be submitted in response to the published NOFO and will undergo scientific and technical merit review and consideration by the NHGRI advisory council before award. Applicants are encouraged to develop collaborative partnerships now to position themselves for the formal solicitation.
RFA-HG-27-008-Full-Announcement.html
Text of this file
Department of Health and Human Services
Part 1. Overview Information
Participating Organization(s)
National Institutes of Health (NIH)
Components of Participating Organizations
National Human Genome Research Institute (NHGRI)
Note: Not all NIH Institutes, Centers, and Offices (ICOs) participate in Announcements. Applicants should carefully note which ICOs participate in this announcement and view their respective areas of research interest at the ICO-Specific Scientific Interests website. ICOs that do not participate in this announcement will not consider applications for funding.
Funding Opportunity Title
IGVF Data and Coordinating Center (U24 Clinical trials Not Allowed)
Activity Code
U24 Resource-Related Research Projects – Cooperative Agreements
Announcement Type
New
Related Notices
Check for any recent Notices of NIH Policy Changes that may impact application requirements.
Funding Opportunity Number (FON)
RFA-HG-27-008
Companion Funding Opportunity
RFA-HG-27-007
, UM1
Research Project with Complex Structure Cooperative Agreement
RFA-HG-27-009
RFA-HG-27-010
Number of Applications
See Part 2, Section III. 3. Additional Information on Eligibility.
Assistance Listing Number(s)
93.172
Funding Opportunity Purpose
The National Human Genome Research Institute (NHGRI) is publishing a Notice of Funding Opportunity (NOFO) to solicit applications for the Impact of Genomic Variation on Function (IGVF) Data and Coordinating Center (DACC). The DACC will serve as the coordinating center for the IGVF Consortium and will be responsible for expanding and further developing a broadly accessible set of resources, including a data portal and a comprehensive and searchable catalog of measured and predicted variant impacts. The DACC will also seek input on the design of the catalog from the broader research community, organize and facilitate consortium activities, and seek opportunities to work with other programs and consortia. As a member of IGVF, the DACC will work with all consortium members to maximize the consortium's overall scientific impact and contribute to accelerating understanding of genomic variation.
Funding Opportunity Goal(s)
As a leading authority in the field of genomics, the mission of the National Human Genome Research Institute (NHGRI) is to accelerate scientific and medical breakthroughs that improve human health by driving cutting-edge research, developing new technologies, and studying the impact of genomics on society. Congress initially established NHGRI to characterize the structure and function of the human genome, including the mapping and sequencing of individual genes. This also includes reviewing and funding research proposals, developing training programs, coordinating international genome research, communicating advances in genome science to the public, and reviewing and funding proposals to address the ethical and legal issues associated with this research. NHGRI supports the development of methods, resources and technologies to improve the health of all humans through advances in genomics research. NHGRI supports research that accelerates foundational resources, technology development, and experimental and computational approaches for basic genomics and functional genomics research; for the application of genomics to medical science and clinical care; and to support ethical, legal and social implications (ELSI) research concerning societal issues that need to be addressed, especially as genomic science advances. For years, NHGRI has participated in the NIH effort to turn discovery into health by helping small businesses develop innovative genomics technologies that improve health and save lives. NHGRI also develops and supports initiatives that expand opportunities for genomics education and careers, cultivating genomics training programs and workforce development initiatives.
Key Dates
Posted Date
October 09, 2026
Open Date (Earliest Submission Date)
November 14, 2026
| Application Due Dates |
| Review and Award Cycles |
| New |
| Renewal / Resubmission / Revision (as allowed) |
| AIDS - New/Renewal/Resubmission/Revision, as allowed |
| Scientific Merit Review |
| Advisory Council Review |
| Earliest Start Date |
December 14, 2026
Not Applicable
Not Applicable
| July 2027 | |
| August 2027 |
September 2027
All applications are due by 5:00 PM local time of applicant organization.
Applicants are encouraged to apply early to allow adequate time to make any corrections to errors found in the application during the submission process by the due date.
No late applications will be accepted for this Notice of Funding Opportunity (NOFO).
Expiration Date
December 15, 2026
Due Dates for E.O. 12372
Not Applicable
Required Application Instructions
It is critical that applicants follow the instructions in the Research (R) Instructions in the How to Apply - Application Guide, except where instructed to do otherwise (in this NOFO or in a Notice from NIH Guide for Grants and Contracts).
Conformance to all requirements (both in the How to Apply - Application Guide and the NOFO) is required and strictly enforced. Applicants must read and follow all application instructions in the How to Apply - Application Guide as well as any program-specific instructions noted in Section IV. When the program-specific instructions deviate from those in the How to Apply - Application Guide, follow the program-specific instructions.
Applications that do not comply with these instructions may be delayed or not accepted for review.
| There are several options available to submit your application through Grants.gov to NIH and Department of Health and Human Services partners. You must use one of these submission options to access the application forms for this opportunity. | |
| Use the NIH ASSIST system to prepare, submit and track your application online. | |
| Use an institutional system-to-system (S2S) solution to prepare and submit your application to Grants.gov and eRA Commons to track your application. Check with your institutional officials regarding availability. | |
| Use Grants.gov Workspace to prepare and submit your application and eRA Commons to track your application. |
Table of Contents
Part 1. Overview Information Key Dates Part 2. Full Text of Announcement Section I. Notice of Funding Opportunity Description Section II. Award Information Section III. Eligibility Information Section IV. Application and Submission Information Section V. Application Review Information Section VI. Award Administration Information Section VII. Agency Contacts Section VIII. Other Information
Part 2. Full Text of Announcement
Section I. Notice of Funding Opportunity Description
Background A major challenge in genomics is defining the role of genomic variation in influencing phenotypes in human biology and diseases. As outlined in NHGRI's 2020 Strategic Vision, studies characterizing the functional consequences of variants have not kept pace with studies of variant discovery or association, and this lack of functional genomic information remains a barrier that impedes progress in genomics.
The Impact of Genomic Variation on Function Consortium (IGVF) was established in 2021 to address the challenge of understanding how genomic variation affects genome function to influence phenotypes using a coordinated team-science approach. The program utilizes emerging experimental and computational genomic approaches to build a catalog of the impact of genomic variants on genome function and phenotypes and to share data and other resources with the scientific community.
Program Goals and Notices of Funding Opportunity (NOFOs) NHGRI is issuing an open call for applications to participate in a second phase of IGVF, based on recent community recommendations on functional variant interpretation and input from the National Advisory Council for Human Genome Research. The goals of the second phase of IGVF are to:
| Test the impact of individual genomic variants on function. |
| Study the effects of genomic variant interactions on function. |
| Model and predict the impacts of genomic variation on function and phenotype. |
| Expand a set of resources to enable future studies. |
To achieve these goals the following NOFOs are issued:
| Systematic Characterization of Genomic Variation to Assess Effects of Individual Variants on Genome Function and Phenotype – RFA-HG-27-007 |
| Genomic Variant Interactions with Other Variants or The Environment – RFA-HG-27-009 |
| Computational Modeling and Analysis of the Impact of Genomic Variation on Function – RFA-HG-27-010 |
| IGVF Data and Coordinating Center – RFA-HG-27-008 |
NHGRI encourages all investigators with ideas aligned with the goals of this NOFO to submit applications.
Research Scope and Objectives In the second phase of IGVF, NHGRI seeks to support a Data and Coordinating Center (DACC) for the IGVF Consortium. The DACC will expand and further develop a set of resources that will enable future studies by the broader research community, and work with all consortium components to ensure coordination across IGVF.
The specific objectives of the DACC are to:
| Build on IGVF efforts to develop a comprehensive and searchable catalog of genomic function and variant impacts. |
| Coordinate data submission and further develop a portal for housing and sharing of consortium resources. |
| Organize and facilitate consortium activities and collaboration. |
| Lead outreach efforts and develop strategies for engaging with the broader research community. |
Build on IGVF efforts to develop a comprehensive and searchable catalog of genomic function and variant impacts. A primary goal of the IGVF Consortium is to produce a set of resources centered on a searchable catalog of measured and predicted variant impacts. The catalog will enable the search for information about variants such as perturbations tested, biological systems, and phenotypic assays used for testing. It will also include assay results, interpretations, and predictions. The DACC will lead development of the catalog in collaboration with other IGVF components and will expand it with data, analyses, and predictions from IGVF and other data sources to produce a scalable resource. The DACC will actively seek input on the design of the catalog from within and outside IGVF, including incorporation of user feedback and collaborations with other consortia to enable searches across resources.
Coordinate data submission and further develop a portal for housing and sharing of consortium resources. The DACC will manage the submission, quality control, assignment of unique identifiers, and versioning of data, metadata, and predictions generated and submitted by members of the consortium. The re-use and adoption of existing data and metadata standards are encouraged to promote interoperability and reproducibility. Where necessary, the DACC will develop standards for data and metadata quality in collaboration with the consortium. Individual IGVF awards will specify data processing pipelines consistent with their proposed assays, and the DACC will work with them to harden pipelines, as necessary, to ensure they are containerized and robust, reproducible, and portable. In some cases, the DACC may implement and run core pipelines for uniform processing. The consortium will make decisions about data processing, pipelines, and implementation responsibilities early during the first year of phase 2.
The DACC will provide access to IGVF data through a data portal and maintain and further develop the portal. The portal will continue to house raw and processed data, metadata, predictions, methodologies, analyses, tools, and other products of the consortium consistent with the FAIR (Findable, Accessible, Interoperable, and Re-usable) Guiding Principles. Data and metadata should be in a form ready for artificial intelligence (AI), advanced machine-learning, and other computational approaches (see Bridge to Artificial Intelligence Recommendations). The portal should be made accessible to the broader research community and include tools for data exploration that are designed with end users in mind. Like the catalog, design should incorporate user feedback. Additionally, procedures, software, and other relevant information should be documented, accessioned, and shared with the broader research community.
At the time of this application, the identity of other funded awards will not be available. It is likely that some of the biological samples, assays, and data types will be like those in Phase I IGVF (https://data.igvf.org/resources/). Review of the companion NOFOs and the Phase I IGVF program is strongly encouraged. To accomodate this, the DACC is expected to be flexible in the implementation of data management workflows. Data are expected to be derived from several types of biological samples, including human samples. The DACC should have experience with, and plans for, working with data that are consented for unrestricted data access as well as with controlled-access data and the registering and deposition of these data into appropriate repositories. Data management needs for the consortium are expected to include data at various levels including raw and processed data, as well as integrative analyses.
Organize and facilitate consortium activities and collaboration. At the start of phase 2, IGVF members will develop coordinated strategies for data generation and analyses. The DACC will work with all IGVF components to define these strategies and will be responsible for facilitating communication and coordination within the consortium, including organizing Steering Committee, working group, and annual investigator meetings, and the establishment of web conference and internal communication platforms (e.g., Wiki, Slack).
The DACC will facilitate interactions within the consortium by providing a workspace (e.g., Synapse, AnVIL workspace) for sharing of work in progress and preliminary datasets, as well as through support of workshops, tutorials, and jamborees. The DACC will also organize and track consortium activities, which include: protocols and methodologies development, cross-consortium activities such as joint projects and analyses, manuscripts in preparation, publications, information about sample consents, and the status of experiments and data (i.e., experiments in progress, data submitted, data released). The DACC will report regularly on the status of the above tracked activities to NHGRI and the consortium.
Lead outreach efforts and develop strategies for engaging with the broader research community. The DACC will work with other consortia and programs to enable interoperability of data resources, which may include sharing of data models and use of Application Programming Interfaces (APIs) to federate resources. The DACC will collect community input about consortium resources (through surveys, workshops, and meeting events) and implement improvements based on feedback. The resource dissemination needs of the consortium will be assessed by the DACC to inform the consortium's outreach efforts, and the DACC will lead development of educational materials, tutorials, and other outreach strategies.
Consortium Formation and Coordination This NOFO uses the cooperative agreement award instrument. The IGVF DACC will become a members of the IGVF Consortium. Consortium members are expected to work collaboratively with NHGRI and the larger consortium towards meeting consortium goals, in addition to the specific research goals outlined in their individual applications.
Members of the IGVF Consortium will work together to:
| Developa catalog of the impact of genomic variants on genome function and phenotypes. |
| Plan experiments, implement studies, and analyze results from within component and consortium-wide projects, typically through working groups. |
| Develop agreed-upon standards and metrics for data, metadata, data quality, and analyses. |
| Contribute all data, metadata, protocols, methodologies, analyses, software, and other products to the IGVF Data and Coordinating Center (DACC) in specified formats. |
| Share best practices and lessons learned within the consortium and with the external community. |
| Lead and actively participate in consortium-wide, Steering Committee, and working group meetings. |
| Contribute to training across the consortium, cross consortia efforts, and broader outreach efforts. |
Consortium members are expected to coordinate assays, variants, and cell types and to develop shared analysis strategies and uniform computational workflows, when applicable, to meet consortium goals, rather than function as independent projects with independent goals. When appropriate, selection of variants and cell types in this second program phase should be done in consideration of variants and cell types characterized in the first phase of IGVF. IGVF research is limited to mammalian systems, with a preference for human studies including samples derived from individuals across a breadth of genetic ancestries and the consideration of sex as a biological variable. Variants selected for testing should account for allele frequencies and disease associations within and across human populations. Proposed cell types and states should be derived from tissues important in development, differentiation, or human diseases.
A central goal of IGVF is the development of data, tools, and other resources that can be used by researchers not funded by this program. Consortium members will be expected to generate pipelines, tools, and educational materials that facilitate community uptake of IGVF data and methods, and to work together to ensure all consortium resources are accessible to a wide variety of potential users. Data, predictions, and models should be shared early and organized in ways that enable a variety of uses by the broader scientific community, from searches of individual variant impacts to large scale integrative or machine learning approaches.
Consortium members will also be expected to continue to collaborate with other projects and consortia with interests in variant interpretation and coordination across resources, especially in efforts to develop shared data processing and analysis pipelines to enable data sharing and comparisons. This includes work with the Atlas of Variant Effects (AVE) Alliance, The Molecular Phenotypes of Null Alleles in Cells (MorPhiC), the Clinical Genome (ClinGen) Resource, the Genomics Research to Elucidate the Genetics of Rare Diseases: Innovation (GREGoRi), the Human Pangenome Reference Consortium (HPRC), and other NHGRI-led consortia, as relevant.
Consents and Data Sharing in IGVF A key deliverable of IGVF is the development of two public data resources, the IGVF Catalog and Data Portal. To facilitate user access to these resources, NHGRI expects that centers will prioritize the use of samples derived from research participants that have been consented for the broadest possible sharing of genomic data, such as consent for unrestricted access, or for general research use and broad sharing through controlled access. Consent language should also avoid restrictions on the types of users who may access these data for genomics research.
To Learn More An informational webinar will be held where NIH staff will present overviews of IGVF NOFOs and answer NOFO-related questions from prospective applicants. Time, date, and webinar links will be made available through a Notice in the NIH Guide. The webinar is open to all prospective applicants, but participation is not required to apply.
Prospective applicants are strongly encouraged to contact the email address listed as the Scientific/Research Contact(s) below to discuss the responsiveness and alignment of their proposed work with program goals.
See Section VIII. Other Information for award authorities and regulations.
Section II. Award Information
Funding Instrument
Cooperative Agreement: A financial assistance mechanism used when there will be substantial Federal scientific or programmatic involvement. Substantial involvement means that, after award, NIH scientific or program staff will assist, guide, coordinate, or participate in project activities. See Section VI.2 for additional information about the substantial involvement for this NOFO.
Application Types Allowed
New
The OER Glossary and the How to Apply - Application Guide provide details on these application types. Only those application types listed here are allowed for this NOFO.
Clinical Trial?
Not Allowed: Only accepting applications that do not propose clinical trials. Note: Applications may propose activities involving human subjects that are not deemed clinical trials.
Need help determining whether you are doing a clinical trial?
Funds Available and Anticipated Number of Awards
NHGRI intends to commit $6M in total costs in FY 2027-2031 to fund 1-2 awards.
Award Budget
Application budgets must reflect the actual needs of the proposed project. Budgets are limited to $4M direct costs per year.
Award Project Period
The maximum project period is 5 years.
NIH grants policies as described in the NIH Grants Policy Statement will apply to the applications submitted and awards made from this NOFO.
Section III. Eligibility Information
1. Eligible Applicants
Eligible Organizations
| Higher Education Institutions - Includes all types | |
| Public/State Controlled Institutions of Higher Education | |
| Private Institutions of Higher Education |
Nonprofits Other Than Institutions of Higher Education
| Nonprofits with 501(c)(3) IRS Status (Other than Institutions of Higher Education) |
| Nonprofits without 501(c)(3) IRS Status (Other than Institutions of Higher Education) |
For-Profit Organizations
| Small Businesses |
| For-Profit Organizations (Other than Small Businesses) |
Local Governments
| State Governments |
| County Governments |
| City or Township Governments |
| Special District Governments |
| Indian/Native American Tribal Governments (Federally Recognized) |
| Indian/Native American Tribal Governments (Other than Federally Recognized) |
Federal Governments
Eligible Agencies of the Federal Government
U.S. Territory or Possession
Other
Independent School Districts
Public Housing Authorities/Indian Housing Authorities
Native American Tribal Organizations (other than Federally recognized tribal governments)
Faith-based or Community-based Organizations
Regional Organizations
Foreign Organizations/Foreign Collaborations
Non-domestic (non-U.S.) Entities (Foreign Organizations) are not eligible to apply.
Non-domestic (non-U.S.) components of U.S. Organizations are not eligible to apply.
Foreign components, as defined in the NIH Grants Policy Statement, are allowed.
NIH will no longer issue awards (i.e., new, renewal, or non-competing continuation) to domestic or foreign entities that involve foreign subawards/subcontracts. All NIH-funded research involving foreign subawards/subcontracts must be submitted in response to a NOFO that is specifically designated for funded international collaborations. See NIH Grants Policy Statement 16.8 Collaborative International Research Awards.
Applications involving foreign subawards/subcontracts submitted in response to this NOFO will be deemed noncompliant and will not be considered for funding. This policy applies to all monetary international collaborations resulting in foreign subawards/subcontracts, however, it does not preclude unfunded international collaborations or foreign components, funding for foreign consultants, or procurement of unique equipment or supplies from foreign vendors.
Required Registrations
Applicant Organizations Applicant organizations must complete and maintain the following registrations as described in the How to Apply - Application Guide to be eligible to apply for or receive an award. All registrations must be completed prior to the application being submitted. Registration can take 6 weeks or more, so applicants should begin the registration process as soon as possible. Failure to complete registration in advance of a due date is not a valid reason for a late submission, please reference NIH Grants Policy Statement Section 2.3.9.2 Electronically Submitted Applications for additional information System for Award Management (SAM) – Applicants must complete and maintain an active registration, which requires renewal at least annually. The renewal process may require as much time as the initial registration. SAM registration includes the assignment of a Commercial and Government Entity (CAGE) Code for domestic organizations which have not already been assigned a CAGE Code. Foreign organizations must obtain a NATO Commercial and Government Entity (NCAGE) Code (in lieu of a CAGE code) in order to register in SAM. Unique Entity Identifier (UEI)- A UEI is issued as part of the SAM.gov registration process. The same UEI must be used for all registrations, as well as on the grant application.
| eRA Commons - Once the unique organization identifier is established, organizations can register with eRA Commons in tandem with completing their Grants.gov registrations; all registrations must be in place by time of submission. eRA Commons requires organizations to identify at least one Signing Official (SO) and at least one Program Director/Principal Investigator (PD/PI) account in order to submit an application. |
| Grants.gov – Applicants must have an active SAM registration in order to complete the Grants.gov registration. |
Program Directors/Principal Investigators (PD(s)/PI(s)) All PD(s)/PI(s) must have an eRA Commons account. PD(s)/PI(s) should work with their organizational officials to either create a new account or to affiliate their existing account with the applicant organization in eRA Commons. Obtaining an eRA Commons account can take up to 2 weeks.
All PD(s)/PI(s) must be registered with ORCID. The personal profile associated with the PD(s)/PI(s) eRA Commons account must be linked to a valid ORCID ID. For more information on linking an ORCID ID to an eRA Commons personal profile see the ORCID topic in our eRA Commons online help.
Eligible Individuals (Program Director/Principal Investigator)
Any individual(s) with the skills, knowledge, and resources necessary to carry out the proposed research as the Program Director(s)/Principal Investigator(s) (PD(s)/PI(s)) is invited to work with their organization to develop an application for support.
For institutions/organizations proposing multiple PDs/PIs, visit the Multiple Program Director/Principal Investigator Policy and submission details in the Senior/Key Person Profile (Expanded) Component of the How to Apply - Application Guide.
2. Cost Sharing This NOFO does not require cost sharing as defined in the NIH Grants Policy Statement NIH Grants Policy Statement Section 1.2 Definition of Terms.
3. Additional Information on Eligibility Number of Applications
Applicant organizations may submit more than one application, provided that each application is scientifically distinct.
The NIH will not accept duplicate or highly overlapping applications under review at the same time, per NIH Grants Policy Statement Section 2.3.7.4 Submission of Resubmission Application. This means that the NIH will not accept:
| A new (A0) application that is submitted before issuance of the summary statement from the review of an overlapping new (A0) or resubmission (A1) application. |
| A resubmission (A1) application that is submitted before issuance of the summary statement from the review of the previous new (A0) application. |
| An application that has substantial overlap with another application pending appeal of initial peer review (see NIH Grants Policy Statement 2.3.9.4 Similar, Essentially Identical, or Identical Applications). |
Section IV. Application and Submission Information
1. Requesting an Application Package The application forms package specific to this opportunity must be accessed through ASSIST, Grants.gov Workspace or an institutional system-to-system solution. Links to apply using ASSIST or Grants.gov Workspace are available in Part 1 of this NOFO. See your administrative office for instructions if you plan to use an institutional system-to-system solution.
2. Content and Form of Application Submission It is critical that applicants follow the instructions in the Research (R) Instructions in the How to Apply - Application Guide except where instructed in this notice of funding opportunity to do otherwise (in this NOFO, in a policy notice, or other notice from NIH Guide for Grants and Contracts). Conformance to the requirements in the How to Apply - Application Guide is required and strictly enforced. Applications that are out of compliance with these instructions may be delayed or not accepted for review.
Page Limitations All page limitations described in the How to Apply – Application Guide and the Table of Page Limits must be followed.
For this specific NOFO, the Research Strategy is limited to 30 pages (exclusive of the Specific Aims page).
Instructions for Application Submission
The following section supplements the instructions found in the How to Apply – Application Guide and should be used for preparing an application to this NOFO.
SF424(R&R) Cover All instructions in the How to Apply - Application Guide must be followed.
SF424(R&R) Project/Performance Site Locations
SF424(R&R) Other Project Information
SF424(R&R) Senior/Key Person Profile
Key personnel should demonstrate strong scientific, technical, and management expertise consistent with the objectives of the DACC. This should include experience in working in collaborative environments and coordination of large genomics data research efforts, and experience with administrative management of research and/or resource-based efforts that serve the research community. The DACC is expected to include expertise in genomics, data curation and provenance, bioinformatics tool development, and implementation of data sharing.
The PD(s)/PI(s) must designate a dedicated Project Manager to direct the day-to-day operations of the Coordinating Center. A PD/PI may serve as the Project Manager.
R&R Budget
| For single PD/PI applications, the PD/PI is expected to devote at least 3 person months, based on a 12-month calendar. If multi-PDs/PIs are proposed, then each PD/PI is expected to commit sufficient time to serve his/her proposed role, with a minimum aggregate PD/PI effort of 3 person months and at least one PI devoting 2 months. The appropriateness of the effort of key personnel must be justified in the budget justification. | |
| Budgets should include support for a dedicated Project Manager who will devote a minimum of 6 person months, based on a 12-month calendar, to oversee the day-to-day activities of the DACC, coordinate across DACC sites, if applicable, and be responsible for promptly providing requested reporting information to NHGRI Program Staff. A PD/PI may serve as the Project Manager. | |
| Budgets should include support for annual in-person consortium meetings (approximately 200 participants) to fully cover costs of planning, meeting facilities and logistics, including audiovisual support for virtual attendance, participant food and beverages in accordance with applicable NIH policy, and travel and accommodations for members of the External Consultants Panel (5 people). | |
| Budget should include costs for catalog and data portal user training and feedback through surveys, user groups and workshops, community jamborees, and other targeted events and activities. | |
| Budgets should include costs for establishing and managing web conference and communication platforms. Web conference resources should allow for at least monthly Steering Committee meetings (30-40 participants) and consortium web conferences (approximately 150 participants), and at least 10 bi-weekly working group web conferences for 20–30 participants per group. | |
| Budgets should include costs for consortium training, tutorials, and data jamborees. | |
| Budget should include funds for the PD(s)/PI(s) and key personnel to attend the initial consortium kickoff meeting, and for the PD(s)/PI(s) and 2–6 members of the center to attend annual consortium meetings thereafter that start in year 1. | |
| Budgets should include any funds required to support sharing of scientific data under this NOFO. This should include funds to prepare data for submission to appropriate repositories. NIH provides guidance on allowable costs for data management and sharing here. For projects generating genomic data derived from research participants, investigators should consider costs associated with complying with the NIH and NHGRI GDS Policy expectations (e.g., obtaining samples with explicit informed consent for future research use and broad data sharing, implementing processes to seek new consent from study participants, etc.). |
R&R Subaward Budget
PHS 398 Cover Page Supplement
PHS 398 Research Plan All instructions in the How to Apply - Application Guide must be followed, with the following additional instructions:
Specific Aims: Describe the specific goals of the DACC and its role in achieving the overall objectives of the IGVF Consortium.
Research Strategy: In the Research Strategy, applicants should propose plans, approaches, and potential alternative strategies for carrying out the goals of the DACC. The Research Strategy should consist of the following sections uploaded as a single PDF attachment:
| Center Overview |
| Approach–IGVF Catalog Development |
| Approach–Data Submission Coordination and Further Development of Data Portal |
| Approach–Consortium Organization and Collaboration |
| Approach–Outreach Efforts |
| Center Management |
Center Overview
| Provide an overview of the proposed Data and Coordinating Center (DACC) and the goals of the center. This section should address the significance, innovation, and approach of the proposed center and center's plans. The first two may be included here under subsections titled, "Significance" and "Innovation". All three should be further detailed in the later sections. We highly encourage that the center's activities be divided into two components: (1) Data Coordination and (2) Consortium Coordination. |
| Provide a description of the significance of the center's proposed plans to human health and disease. |
| Provide an overview of the center's innovations as they relate to catalog and data portal development, consortium coordination, including coordination with other programs, and outreach efforts. |
| If there are additional responsibilities that are not detailed in the NOFO but are considered necessary for effective operation of the DACC, applicants should note them in this section and other sections, as appropriate, and describe potential approaches. |
Approach–IGVF Catalog Development
| Describe plans for further development of the IGVF catalog of measured and predicted variant impacts. This plan must consider the varied data modalities, analyses, and predictions produced by the consortium; account for development of a robust and scalable catalog capable of enabling the search for information about variants such as perturbations tested, biological systems, and phenotypic assays used for testing; and also include assay results, interpretations, and predictions. The DACC will lead development of the catalog in collaboration with the consortium. |
| Describe the approach for incorporating analyses from different assays and predictions, including considerations for differences in phenotypic endpoints and biological systems, and the inclusion of new types of information that may be reported in the catalog. This should include plans for incorporating information from other data sources, and include a demonstration of how computational infrastructure and personnel may be adjusted over time and capacity to scale activities, volumes, or complexity changes within the consortium. |
| Describe plans and approaches for working with the consortium to present and interpret analyses, discordant results, as well as sparse data. This section should also include descriptions of plans for query tools, user interfaces, visualization tools, and use of Application Programming Interfaces (APIs) or web services, as well as plans for employing best practices and state-of-the-art technology. Where appropriate, there should be emphasis on data interoperability and scalability of tools, software, and approaches. Software that are broadly utilized, especially by other programs and consortia, should be used, where applicable. |
Approach–Data Submission Coordination and Further Development of Data Portal
| Provide a description of submission processes for all consortium data, metadata, models, predictions, and analyses. This should include plans for working with the consortium to establish and use standardized formats that are robust and reproducible, controlled vocabularies, and ontologies, and to facilitate regular and efficient transfer of data and metadata. Plans to provide training to consortium members and support should be described as well. |
| Describe processes for providing unique data identifiers to enable tracking and storing of data provenance, as well as plans for monitoring data quality and protecting transferred data. |
| Describe plans for hardening and implementing data processing pipelines, documenting pipeline descriptions and parameters, and providing access to documentation and pipeline software with versioning to the broader research community. Budgets should account for data processing pipeline hardening, implementation, and other developmental activities, as needed. |
| Describe plans to ensure data is generated and submitted consistent with the FAIR Guiding Principles and in AI-ready formats appropriate for advanced machine learning approaches. |
| Describe plans for development of a robust and scalable data portal capable of housing all data, models, predictions, metadata, protocols, methodologies, software, tools, and analyses of the consortium generated for the duration of the project period. This should include a description of metadata-based query tools, use of APIs or web services, and methods for uploading/downloading data from the portal, as well as plans for employing best practices and state-of-the-art technology. Where appropriate, there should be emphasis on data interoperability and use of existing software. |
| Describe how computational infrastructure and personnel may be adjusted over time to meet the needs of the consortium. Applicants should demonstrate the capacity to scale activities. |
| Describe plans for management of both unrestricted access and controlled-access data, both for sharing and analysis within the IGVF Consortium and for sharing with the broader community. Plans should include either a demonstrated ability to share controlled-access data, or an approach to collaborate with existing NIH repositories for the registering and deposition of controlled-access data (e.g., AnVIL). This should include plans for facilitating consortium-wide data sharing policies and ensuring agreed upon consent and data deposition expectations are met. |
| Describe strategies for transfer of data to appropriate repositories. |
| Detail a transition plan for the transfer of consortium-generated data, software, and other resources such as the catalog in the event the DACC is transferred to another recipient or the Government. These should be included in a subsection titled "Transition Plan". Refer to the "Data/software ownership and transition to another recipient" section under the Cooperative Agreement Terms and Conditions of Award below. This should include a plan to ensure the sustainability, long-term archiving, maintenance, expansion, as appropriate, and distribution of data, predictions, analyses, and other resources developed by the consortium beyond the funding period of this program. This may include transfer of data, analyses, and other resources to NHGRI-designated repositories at end of the project. |
Approach–Consortium Organization and Collaboration
| Describe plans for facilitating interactions within the consortium, including how the DACC will work with all IGVF components to define strategies for data generation and analyses. This should further describe plans for organizing consortium meetings such as working groups, Steering Committee meetings, and consortium jamborees. Describe plans and approaches for enabling communication and coordination of consortium activities such as establishment of web conferencing platforms and any needed communication platforms. |
| Describe plans to facilitate in-person investigator meetings. This should include descriptions of needed logistical and operational management. Include plans to incorporate innovative strategies for conversion of in-person meetings to virtual, as needed, and other strategies for enabling interactions. |
| Describe plans for development of a workspace for the sharing of work in progress and preliminary datasets. |
| Describe strategies for tracking consortium activities, experiments, and data, and regularly reporting status to NHGRI and the consortium. |
Approach–Outreach Efforts
| Describe plans for working with other consortia and programs to enable resource interoperability. This should outline potential strategies for facilitating collaborative efforts such as the sharing of data models, use of APIs to potentially federate resources, and sharing of standards and best practices. |
| Describe plans for collecting community input about the IGVF catalog and data portal and implementing improvements based on feedback. This should include a plan for evaluating usability of the catalog and portal that includes members of the consortium and outside users. This should include a description of the targeted outside user communities (e.g., computer scientists, biologists, geneticists, clinical genomicists), a description of specific use cases that will be evaluated, evaluation frequency, and how this information will be used to improve utility. This should include a description of feedback methods such as surveys, user groups and workshops, community jamborees, and other targeted events and activities. |
| Provide a strategy for disseminating information to promote consortium resources and activities to the broader research community. This should include an overview of target audience(s) and methods (e.g., tutorials, workshops, plans for announcement via the portal and social media, and online training resources) and include plans for a dedicated consortium website and social media presence. |
Center Management
| Describe how the center will be structured to achieve the center's goals. This should include the management structure of the center, role of the Project Manager responsible for day-to-day operations, components of the center and how they will be integrated to form a cohesive center, key personnel, and their responsibilities, and overall center leadership. This should include a description of the expertise of the team without duplicating information in biosketches, and a description of how consortium activities will be managed, including interactions with other consortium projects and centers, data wrangling, and management of any external collaborations, if relevant. |
| Discuss experiences (if any) in working in collaborative environments and coordination of large genomics data research efforts, and experience with administrative management (including management of subawards) of research and/or resource-based efforts that serve the research community. To address collaborative potential, provide a vision/structure of how the center will work with other components on consortium-wide activities such establishing data and metadata standards, and implementing pipelines to be used by the consortium. This should outline examples and describe how the center will be set up to modify activities and respond to emerging consortium plans and potentially new technologies. |
| In a subsection titled "Milestones," include a detailed timeline and milestones for tracking all aspects of the center and the proposed activities. These should include milestones for proposed catalog and data portal iterations, data submission, processing, and releases, other consortium activities, and outreach efforts on a yearly basis. Milestones should also include points of interactions with other IGVF components. Whenever feasible, milestones should provide quantitative metrics for assessing the center's progress. As needed, milestones will be reviewed and updated in consultation and with the approval of NHGRI. |
Resource Sharing Plan: Individuals are required to comply with the instructions for the Resource Sharing Plans as provided in the How to Apply - Application Guide.
The Resource Sharing Plan should summarize whether and how resources (e.g., educational materials; methods; models; physical products, materials, and reagents; protocols; research findings and products; and software) will be made available. Applicants should include a description of the format, an indication of who will be responsible for implementation and plans for long-term maintenance, whether there will be opportunities for community input and feedback, platform(s) or mechanism(s) that will be used to make resources publicly accessible, and proposed timeline for implementing the Resource Sharing Plan. Resource Sharing Plans should not duplicate other sections of the main Research Plan but should refer to them when appropriate. After initial review, NHGRI program staff may negotiate revisions of this plan with the prospective awardee. The final negotiated version of this plan will become a term and condition of the award.
In addition to the above expectations, NHGRI expects that plans for sharing software generated under this funding opportunity will meet the following expectations:
| Applicants sharing software are encouraged to consider the NIH Best Practices for Sharing Research Software and the Findable, Accessible, Interoperable, and Reusable for Research Software (FAIR4RS) Principles, and to use software licenses that allow for unrestricted redistribution and modification of the software. |
| Source code should be freely available to biomedical researchers and educators in the non-profit sector, such as institutions of education, research institutions, and government laboratories. The terms of software availability should permit the commercialization of enhanced or customized versions of the software, or incorporation of the software or pieces of it into other software packages. |
| NHGRI encourages making software citable with persistent identifiers such as a DOI or a citation. |
| To preserve utility to the community, the software should be transferable such that another individual or team can continue development if the original investigators are unable to do so. |
| Software should be containerized and promote reproducibility and use of automated pipelines, where possible. Developed software are expected to be tested utilizing a relevant testing framework where appropriate (e.g., unittest). |
| Applicants should take responsibility for creating the original and subsequent "official" versions of a piece of software. |
For more guidance on writing a Resource Sharing Plan, see https://www.genome.gov/about-nhgri/Policies-Guidance/Writing-a-Resource-Sharing-Plan.
Other Plan(s):
All instructions in the How to Apply - Application Guide must be followed, with the following additional instructions:
| A Data Management and Sharing Plan (DMS Plan) is required for any NIH-funded or conducted research that will generate scientific data. Applicants must submit the DMS Plan at the time of application using the NIH DMS Plan Format Page. The DMS Plan must address the elements in the structured format. Where the DMS Plan Format Page requires a "Yes or No" response, no additional narrative is allowed. | |
| Recipients must comply with the NIH Genomic Data Sharing Policy (NIHGPS 8.2.3.3). | |
| All scientific data, metadata, and predictions should be submitted to the IGVF Data Portal. The IGVF DACC will be responsible for additional deposition into appropriate NIH-designated repositories. |
Appendix: Only limited Appendix materials are allowed. Follow all instructions for the Appendix as described in the How to Apply - Application Guide.
No publications or other material, with the exception of blank questionnaires or blank surveys, may be included in the Appendix.
PHS Human Subjects and Clinical Trials Information When involving human subjects research, clinical research, and/or NIH-defined clinical trials (and when applicable, clinical trials research experience) follow all instructions for the PHS Human Subjects and Clinical Trials Information form in the How to Apply - Application Guide, with the following additional instructions:
If you answered "Yes" to the question "Are Human Subjects Involved?" on the R&R Other Project Information form, you must include at least one human subjects study record using the Study Record: PHS Human Subjects and Clinical Trials Information form or Delayed Onset Study record.
Study Record: PHS Human Subjects and Clinical Trials Information
Delayed Onset Study
Note: Delayed onset does NOT apply to a study that can be described but will not start immediately (i.e., delayed start). All instructions in the How to Apply - Application Guide must be followed.
PHS Assignment Request Form
3. Unique Entity Identifier and System for Award Management (SAM) See Part 2. Section III.1 for information regarding the requirement for obtaining a unique entity identifier and for completing and maintaining active registrations in System for Award Management (SAM), NATO Commercial and Government Entity (NCAGE) Code (if applicable), eRA Commons, and Grants.gov
4. Submission Dates and Times Part I. contains information about Key Dates and times. Applicants are encouraged to submit applications before the due date to ensure they have time to make any application corrections that might be necessary for successful submission. When a submission date falls on a weekend or Federal holiday, the application deadline is automatically extended to the next business day.
Organizations must submit applications to Grants.gov (the online portal to find and apply for grants across all Federal agencies). Applicants must then complete the submission process by tracking the status of the application in the eRA Commons, NIH's electronic system for grants…
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