Brain connects: mapping connectivity of the human brainstem in a nuclear coordinate system

Active Cooperative Agreement Awarded Last action

Award ID
U01NS132181
Recipient
Awarding agency
Obligated
$4,659,067

Award facts

Assistance listing
93.242 Mental Health Research Grants
Completion date 79% complete
Originally
Place of performance
Charlestown, MA 02129, USA

Award details come from USAspending.gov.

Description

Abstract
(30 lines of text limit) the ~1 billion neurons that form the human brainstem are organized at multiple scales, ranging from their cell type-specific patterns of dendritic arborization, to local circuits embedded within large-scale projection systems spanning the brainstem, and a complex nuclear architecture. In this project, we will image across this vast range of scales to build technologies to create a multiscale atlas akin to google earth for the human brainstem to visualize brainstem-wide networks and zoom in to the level of individual, labeled cells and their connectivity at micrometer resolution within the context of individual nuclei. This dramatic advance will be made possible through the use of an array of imaging technologies, including light-sheet fluorescence microscopy (LSFM), tissue clearing, immunohisto-chemistry (IHC), 2-photon expansion microscopy (2PEM), magnetic resonance imaging (MRI) and newly developed techniques in polarization-sensitive optical coherence tomography (PS- OCT). PS-OCT in particular is a potentially transformative technology as IT provides micrometer resolution over large volumes of tissue, images all of the tissue (as opposed to fluorescence), does not require mounting and staining, can be automated, is essentially distortion free as IT images the tissue prior to cutting, and with innovations we propose in our project, allows direct measures of 3D axonal orientation. LSM-based IHC will provide molecular, morphological and spatial properties of cells and their projections that will enable US to nuclear boundaries to place the connections in a nuclear context, 2PEM will provide direct validation of the 3D-psoct, and the OCT will also enable US to remove the distortions induced by cutting and clearing, and transfer information to intact brainstem and whole-hemisphere MRI for quantitative atlasing and in vivo inference.

Transactions

Action Obligated Date
Amendment $0
Amendment $0
Amendment $0
Amendment $348,496
Amendment $1,366,957
Amendment $0
Amendment $0
Amendment $1,471,807
Original award $1,471,807

Subawards

Subrecipient Amount Awarded
Trustees Of Boston University BU will assist MGH in the experimental design, testing, and data collection of the PSOCT imaging that will be co-registered with ex vivo MRI and… $292,183
Laboratorio Europeo DI Spettroscopie NON Lineari The LENS (European Laboratory of Non-linear spectroscopy) research ranges from theoretical physics to all the most current areas of experimental and applied… $301,134
Icahn School Of Medicine At Mount Sinai Dr. Hof will serve as the Co�Principal Investigator (MPI) and leader of the Mount Sinai component of this project (Mapping connectivity in the human… $925,863

Quick answers

Who received award U01NS132181?

U01NS132181 was awarded to The General Hospital Corporation by National Institute of Neurological Disorders and Stroke (National Institutes of Health) on September 1, 2023.

How much is award U01NS132181 worth?

$4,659,067 has been obligated on U01NS132181.

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