Chemically induced dimerization systems for high throughput enzyme assays

Ended Project Grant Awarded Last action

Award ID
R43GM154542
Recipient
Awarding agency
Obligated
$270,929

Award facts

Assistance listing
93.859 Biomedical Research and Research Training
Completion date
Originally
Place of performance
Wisconsin, USA

Award details come from USAspending.gov.

Description

Abstract
Enzymatic assays are critical for drug discovery: half of approved small molecule drugs inhibit enzymes, and enzymatic HTS (high throughput screening) assays are typically the most frequently used tool during development of a candidate molecule. Even as computational approaches become more prevalent, enzymatic assays are required to test the activity of molecules following virtual screens and throughout the HIT-to-lead process. Enzymes that produce small molecules can present a special challenge from an assay development perspective because selective detection of reaction products that closely resemble substrates in a homogenous format may exceed the molecular recognition capabilities of known affinity reagents such as antibodies. Examples include epigenetic enzyme families currently under intense focus as therapeutic targets: histone acetyltransferases, sirtuins, and histone demethylases. To overcome these limitations, we will combine the vast ligand binding capabilities of native proteins with in vitro selection to develop chemically induced dimerization (CID) systems for small molecule enzyme products. In phase I, we will develop and validate a CID that is capable of detecting nanomolar concentrations of COA (coenzyme a) in the presence of excess accoa (ACETYL-COA), providing a universal assay method for histone acetyltransferases. Candidate COA binding domains (BDCOA) will be selected from native proteins, and a library of randomized antibody variable domains will then be screened to identify second binding domains that recognize the COA- BDCOA interface, providing a substantial enhancement of affinity and selectivity. The resulting COA CID will be formatted for TR-fret and validated with purified hats in pilot screens, enabling a robust universal HAT enzymatic activity with the sensitivity and specificity needed for HTS. In phase II, we will develop CID systems for other small molecule enzyme products that have proven intractable to immunodetection, e.g., succinate for histone demethylases and O-ACETYL-ADP-ribose for histone deacetylases. The CID system will accelerate drug discovery by providing a very broad and flexible HTS enzyme assay platform for both established and emerging target families.

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Original award $270,929

Quick answers

Who received award R43GM154542?

R43GM154542 was awarded to Bellbrook Labs LLC by National Institute of General Medical Sciences (National Institutes of Health) on September 20, 2024.

How much is award R43GM154542 worth?

$270,929 has been obligated on R43GM154542.

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