Attachment H - Laboratory Tests Equipment_FINAL.docx

DOCX document 44 KB Posted

Attached to
Laboratory Information Management System RFP
Solicitation number
24-448DOIT-APP44-B-38919
Issued by
St. Clair County, Illinois

About this file

This is an attachment document titled "Laboratory Tests & Equipment" associated with the Illinois Department of Innovation and Technology and Department of Public Health's Request for Proposal for a Laboratory Information Management System (RFP 24-448DOIT-APP44-B-38919). The document details the comprehensive list of laboratory tests and equipment that the proposed LIMS solution must be able to support and interface with. The tests are categorized into three main areas: Clinical Laboratory Tests (66 different tests ranging from virus detection to bacterial identification), Environmental Laboratory Tests (13 tests focusing on food safety and environmental contamination), and Newborn Screening Laboratory Tests (17 tests covering metabolic disorders and genetic screening).

The document also includes a detailed equipment list specifying the various laboratory instruments and analyzers that must interface with the LIMS solution. This includes equipment from multiple manufacturers such as Abbott, Bio-Rad, Illumina, PerkinElmer, and others, covering a wide range of analytical capabilities from mass spectrometry to genetic screening processors. The equipment list comprises approximately 30 different instruments that are currently in use across the laboratory facilities.

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Attachment B - State Standard Security Requirements_FINAL.docx DOCX document
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STATE OF ILLINOIS

Department of Innovation and Technology Department of Public Health Request for Proposal Laboratory Information Management System RFP

24-448DOIT-APP44-B-38919

Attachment H – Laboratory Tests & Equipment Clinical Laboratory Tests Below is a list of all current clinical tests the Solution shall be able to perform.

Table 1: Clinical Tests

#
Clinical Laboratory Test Name
CT-1
Adenovirus (RP2 Panel)
CT-2
Bacillus anthracis (Anthrax)
CT-3
Bordetella pertussis (whooping cough; molecular)
CT-4
Brucella spp. (Brucellosis)
CT-5
Burkholderia pseudomallei (Melioidosis)
CT-6
Burkholderia mallei (Glanders)
CT-7
California Encephalitis virus
CT-8
Carbapenem-Resistant Enterobacteriaceae & CRPA (Molecular), CIM Sensitivity
CT-9
Chikungunya Virus (molecular)
CT-10
Chikungunya Virus (serology)
CT-11
Chlamyda pneumoniae (RP2 Panel)
CT-12
Chlamydia trachomatis (molecular screen)
CT-13
Coronavirus 229E, HKU1, NL63, OC43 (RP2 Panel)
CT-14
Coxiella burnetii (Q fever)
CT-15
Dengue virus (molecular)
CT-16
Dengue virus (serology)
CT-17
Ebola Virus
CT-18
Escherichia coli (shiga toxin producers, enteric pathogen)
CT-19
Franciscella tularensis (Tularemia)
CT-20
Haemophilus influenza
CT-21
Human Immunodeficiency virus, types 1 and 2 (antibody screen) - Serum
CT-22
Influenza virus, Molecular
CT-23
Influenza A (RP2 Panel)
CT-24
Influenza A H1 (RP2 Panel)
CT-25
Influenza A H1-2009 (RP2 Panel)
CT-26
Influenza A H3 (RP2 Panel)
CT-27
Influenza B (RP2 Panel)
CT-28
Lead (blood)
CT-29
Legionella (culture)
CT-30
Legionella (molecular)
CT-31
Listeria monocytogenes
CT-32
Measles virus (Rubeola; molecular)
CT-33
Metapneumovirus, Human (RP2 Panel)
CT-34
Monkey Pox Virus
CT-35
Mumps virus (molecular)
CT-36
Mycobacterium tuberculosis, acid fast bacilli smear analysis (Microscope)
CT-37
Mycobacterium tuberculosis, Primary Clinical Specimens
CT-38
Mycobacterium tuberculosis, Culture Confirmation
CT-39
Mycobacterium tuberculosis, drug susceptibility in culture
CT-40
Mycobacterium tuberculosis, strain genotyping (send outs only)
CT-41
Mycoplasma pneumoniae (RP2 Panel)
CT-42
Neisseria gonorrhoeae (culture) AST
CT-43
Neisseria gonorrhoeae (molecular screen)
CT-44
Neisseria meningitidis
CT-45
Norovirus, G1 and G2 (molecular)
CT-46
Orthopox screen, non-variola (molecular)
CT-47
Parainfluenza 1 (RP2 Panel)
CT-48
Parainfluenza 2 (RP2 Panel)
CT-49
Parainfluenza 3 (RP2 Panel)
CT-50
Parainfluenza 4 (RP2 Panel)
CT-51
Plasmodium spp. (malaria)
CT-52
Rabies virus (animal test only)
CT-53
Respiratory Syncytial Virus A (RP2 Panel) GenMark
CT-54
Respiratory Syncytial Virus B (RP2 Panel)
CT-55
Rhinovirus/Enterovirus (RP2 Panel)
CT-56
Salmonella spp. (enteric pathogen)
CT-57
SARS-COV-2 (molecular PCR)
CT-58
SARS COV-2 (RP2 Panel)
CT-59
Shigella spp. (enteric pathogen)
CT-60
Treponema pallidum (syphilis)
CT-61
Varicella-zoster virus (chicken pox; molecular)
CT-62
Variola Virus (Smallpox; molecular)
CT-63
Vibrio spp. (enteric pathogen)
CT-64
Yersinia pestis (Plague)
CT-65
Yersinia spp. (enteric pathogen)
CT-66
Zika Virus (serology)

Environmental Laboratory Tests Below is a list of all current environmental tests the Solution shall be able to perform.

Table 2: Environmental Tests

#
Environmental Laboratory Test Name
ET-1
Aerobic and Coliform Count in Dairy using Petri-film
ET-2
Alkaline Phosphatase in Dairy Samples
ET-3
Coliform (Total and E. coli) in Water - Colilert
ET-4
E. coli O157:H7 in Food or Env Swabs/Sponges
ET-5
Environmental Lead
ET-6
Inhibitory Substances in Dairy Samples - Charm
ET-7
Inhibitory Substances in Dairy Samples - Delvotest
ET-8
Legionella (Legilert)
ET-9
Listeria species in Food and Env Swabs/Sponges
ET-10
Residual Bacterial Count in Milk Containers
ET-11
Ricin Toxin
ET-12
Salmonella in Food and Env Swabs/Sponges
ET-13
Total Coliform and E. coli in Dairy Water -MTF method

Newborn Screening Laboratory Tests Below is a list of all current newborn screening tests the Solution shall be able to perform.

Table 3: Newborn Screening Tests

#
Newborn Screening Laboratory Test Name
NT-1
MS/MS Metabolic
NT-2
LSD (Lysosomal Storage Disorders)
NT-3
Psychosine (2nd tier test for Krabbe LSD)
NT-4
30kbdel (3rd tier test for Krabbe LSD)
NT-5
ALD (Adrenoleukodystrophy)
NT-6
Sickle Cell Hemoglobinopathy
NT-7
Biotinidase
NT-8
CAH (17α-OH-progesterone, Congenital Adrenal Hyperplasia)
NT-9
T4 (Thyroxine)
NT-10
TSH (Thyroid Stimulating Hormone)
NT-11
IRT (Immunoreactive Trypsinogen)
NT-12
CFTR (Cystic Fibrosis Transmembrane Conductance Regulator, 2nd tier test for IRT)
NT-13
Galactosemia (Interpretation requires TGAL and GALT result)
NT-14
TGAL (Total Galactose)
NT-15
GALT (Glactose-1-Phosphate uridyl transferase)
NT-16
SCID (Severe Combined Immunodeficiency)
NT-17
SMA (Spinal Muscular Atrophy)

Laboratory Equipment List The below list includes all current laboratory equipment the Solution shall interface with.

Table 4: Laboratory Equipment List

Manufacturer
Model Number
Description Name

3M

Petrifilm Plate Reader

Abbott
ARHITECT
i1000SR
Agena Bioscience
MassARRAY
CFTR mutation analyzer

Applied Biosystems

7500 Fast DX

Applied Biosystems

7500 Fast RUO

Applied Biosystems

Quant Studio DX

Bio Merieux

Vitek 2 Compact

Bio Merieux

Vidas

Bio Merieux

Vitek 2

Bio Merieux

Vitek 2 Compact

Bio-Rad
DP6K012103
Geenius Reader
Bio-Rad
CFX384
q-PCR thermocyclers for SCID/SMA
Brady
IP300
Label Printer
Brady Printer
BP-PR300
Label Printer

CEPHEID Instrument

TB sensitivity Instrument

Charm
611
Novalum

Illumina

MiSeq DX

Illumina

MiSeq

MGIT
960
Bacterial ID
MGIT
320
Bacterial ID
Perkin Elmer
NexION 2000
ICPMS for Blood Lead
PerkinElmer
DBS Puncher
Dried Blood Spot puncher
PerkinElmer
Panthera-Puncher 9
Dried Blood Spot multi-puncher
PerkinElmer
GSP
Genetic Screening Processor for CAH, T4, TSH, IRT, TGAL & GALT
PerkinElmer
QSight 225
Mass Spectrometer for LSD and MS/MS metabolic screening
PerkinElmer
QSight 210
ALD Mass Spectrometer
Precision 2000
2000
Automated Pipetting System

Roche

Cobas X480

Roche

Cobas Z480

Skylar

BluVision Discrete Analyzer

ThermoFisher
Icap-RQ
Blood Lead
Trinity Biotech
GeneSys
HPLC screening system
Varian
820-MS
ICP Mass Spectrometer

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