Statement of Work.pdf
PDF 142 KB Posted
- Attached to
- Illumina Eukaryotic RNA Sequencing Federal contract opportunity
- Solicitation number
- 12805B23Q0813
About this file
This statement of work outlines requirements for RNA sequencing services to support research on Hydrangea macrophylla. The Agricultural Research Service seeks a contractor to perform Illumina PE150 RNA sequencing on 288 samples of H. macrophylla to a depth of 6 gigabytes per sample, totaling an estimated 936 gigabytes of raw sequence data. Deliverables include data quality reports, raw sequencing files, and filtered reads. The contractor must provide sample quality control and deliver all raw data files via FTP or hard drive within 60 working days of DNA quality confirmation. Invoices will be submitted through the Invoice Processing Platform system. The period of performance is 60 working days from award. Technical and contracting representatives for the government are identified.
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Other files for this federal contract opportunity
| File | Type | Posted |
|---|---|---|
| Attach 02 Schedule of Items 12805B23Q0813.xlsx | XLSX spreadsheet | |
| 12805B23Q0813.pdf |
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Text version
UNITED STATES DEPARTMENT OF AGRICULTURE
AGRICULTURAL RESEARCH SERVICE
FLORAL AND NURSERY PLANTS RESEARH UNIT
McMINNVILLE, TN
Statement of Work
FOR
RNA SEQUENCING OF HYDRANGEA MACROPHYLLA
June 1, 2023
STATEMENT OF WORK
A. BACKGROUND
Scientists at the Floral and Nursery Plants Research Unit (FNPRU) produce knowledge, techniques, and plants to support the long-term sustainability and profitability of the nursery and landscape industries. Hydrangea macrophylla is a valuable ornamental nursery crop that is impacted by powdery mildew disease. Understanding the genes responsible for disease tolerance will help scientists develop genetically resistant varieties. Illumina sequencing systems provide both the sequence coverage depth and low error rates necessary to represent the entire set of expressed genes from Hydrangea macrophylla.
B. DESCRIPTION OF SERVICE REQUIREMENTS
Product Name: Illumina Eukaryotic RNA sequencing Species: Hydrangea macrophylla (plant) Genome Size (Mb): 2200 Sample Type: RNA Sequencing Platform & Strategy: Illumina PE150, Q30>80% Data Requirement: 6G raw data per sample No. of Samples: 288 Data analysis: Data quality control Estimated Data Output 936G raw data Deliverables Data summary report, raw data files, filtered reads Turnaround Time: 60 working days after DNA QC confirmation
C. SPECIFIC REQUIREMENTS
The Service provider shall provide RNA sample QC The Service provider shall provide all raw data, including reads, via FTP and/or hard drive.
Invoices are to be submitted electronically into the IPP, (Invoice Processing Platform) system.
D. CONTRACT ADMINISTRATION:
Technical Representative Lisa Alexander
USD-ARS-FNPRU
McMinnville, TN 37110 931-815-5142
Contract Specialist/Administrator Peter Nelson
USDA – ARS - PA
peter.b.nelson@usda.gov 701-795-8354 mailto:peter.b.nelson@usda.gov
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