ATTACHMENT_2_DNA_Sequencing_System_Required_Processing_Times.doc
DOC document 21 KB Posted
- Attached to
- DNA SEQUENCING SYSTEM Federal contract opportunity
- Solicitation number
- NIHOD2014010
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ATTACHMENT_2_DNA_Sequencing_System_Required_Processing_Times
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| File | Type | Posted |
|---|---|---|
| ATTACHMENT_1_DNA_SEQUENCING_DATA_SPECIFICATIONS.doc | DOC document |
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ATTACHMENT 2. - DNA Sequencing System Required Processing Times
| Rapid Run Mode |
| High Output Mode* |
| TruSeq v3 Chemistry |
| HiSeq v4 Chemistry |
ChIP-Seq Transcription Factor 15M Reads 1 × 36 bp 40 samples 7 hours 200 samples 2 days 260 samples 29 hrs mRNA-Seq 40M Reads 2 × 50 bp 15 samples 16 hours 120 samples 5 days 100 samples
2.5 days
Nextera Rapid Capture Exome 37Mb 100x Coverage 2 × 100 bp 20 samples 27 hours 115 samples 10 days 150 samples 5 days
Human Whole Genome >30x coverage 1 sample 27 hours 6 samples 11 days 10 samples 6 days
De novo Sequencing
1.5 Gb Genome
100x Coverage 2 × 150 bp 1 sample 40 hours
*References software use by the requirement standard of HiSeq 2500, or equal.
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