Specification Sheet.pdf

SPECIFICATION SHEET

Storage and Computing Servers for Genomic and Computer Vision Data

I BACKGROUND

The USDA, ARS, Grape Genetics Research Unit in Geneva, New York requires two data storage servers and two computational servers for Storage and Computing of Grapevine Sequencing Data, managed by Cornell University’s Bioinformatics Facility. The Sequencing data is used to evaluate the genomic basis of traits and levels of gene expression in plant tissue responding to treatments. The Imaging data is used to identify traits for genetic improvement.

II. SYSTEM REQUIREMENTS.

Standard support, including 3 years of hardware coverage, plus technical support, 24 Hour Cross ship including 2-way shipping coverage, in providing and supporting the following:

1. Genomics storage server

a. Gbt Ent 36 Bay Epyc Storage Server 3U Up

b. AMD EPYC™ 7003 series processor family

c. 8-Channel RDIMM/LRDIMM DDR4, 16 x DIMMs, with eight 16Gb DDR 4 2933 ECC/REG

d. 2 x SFP+ 10Gb/s LAN ports

e. 36 x 3.5" SATA/SAS hot-swap HDD/ SSD bays, each housing Toshiba 16Tb MG08 3.5" HDD- SAS

f. Two Micron 480Gb 5300 Pro Enterprise SSD

g. Aspeed® AST2500 remote management controller

h. Epyc 7313P 16C/32T 3-3.7GHz

i. LSI/Broadcom 9500-16i 12Gbs Tri-Mode HBA

j. Linux installation

2. Genomics Computational server

a. Tyan 1U All Flash Epyc Storage Server 1U1S Cloud Server,

b. 12 NVMe U.2 w/ 4 SATA 12 NVMe U.2 hot-swap, tool-lessdrive bays, PCIe x16 OCP v2.0

LAN mezzanine slot (Type 1)

c. 2 HH/HL PCIe Gen.4x16 slots

d. 2 NVMe/SATA M.2 slots for boot drives

e. AMD Epyc 7713P 64C/128T

f. 16 x 64Gb DDR 3200 RDIMM (1024Gb)

g. 5 x 3.84Tb DCT PM9A3 U.2 PCIe Gen4 x4

h. Linux installation

3. Computer vision Data storage system

a. The storage system must have an integrated data management system for high throughput of plant phenotypic data.

b. The storage system must be a configured 1PB hard drive in a RAIDZ2 format.

c. Must include equivalent or better than:

a. 2 x Gbt Ent 4U Storage Svr 36 Bay 4U Storage

i. MD61-SC2, 16x DDR4, 2 x 10G SFP+ with QL 41102. 1 x Management LAN, 10/100/1G. AST2500. 7 x LP slots, Redundant. 1200W 80+ Platinum. (Front) 24 x 3.5'' + (Rear) 12 x 3.5'' & 2.5'' Hot-swap HDD, No ODD

d. 4 x Intel Xeon Silver 4214R 12C 2.4GHz

e. 16 x 16GB DDR 4 3200HMz ECC/REG

f. 4 x Micron 480Gb 5300 Pro Enterprise SSD

g. 72 x 18Tb SAS En HD 512MiB

h. 3 years of hardware coverage, plus technical support from a hardware engineer, 24 Hour Cross ship including 2-way shipping coverage.

i. Linux Installation

4. Computer vision Computational server:

a. The operating system must be Ubuntu 20.04 for high throughput of plant phenotypic data, including

Lambda Stack for managing TensorFlow, PyTorch, CUDA, cuDNN, etc

b. The Processor must be 2x AMD EPYC 7713 with 64 cores, 2.0 GHz, 256 MB cache, PCle 4.0.

c. The GPUs must be EDU – 8x RTX A6000 with 48 GB of VRAM per GPU, NVLink, PCle 4.0.

d. Memory must be 1024 GB

e. Operating system drive must be 1.92 TB NVMe.

f. Extra Storage must be at least 3x 1.92 TB | U.2 | MVMe

g. Warranty and support at least 3 years of hardware coverage, plus technical support

h. Warranty includes 24 Hour Cross ship including 2-way shipping coverage

i. Linux Installation

III. Section 508 Accessibility Compliance

It is mandatory that products developed, procured, maintained, or use Electronic and Information Technology (EIT) be accessible to employees with disabilities. Examples of EIT equipment are peripherals, copiers, fax machines, computers.

All Electronic and Information Technology (EIT) procured through this Contract must meet the applicable accessibility standards at 36 CFR 1194, unless an agency exception to this requirement exists.

(36 CFR 1194 implements Section 508 of the Rehabilitation Act of 1973, as amended, and are viewable at: http://www.section508.gov/, then go to 508 Law.

IV. Delivery and System Installation:

a. System Footprint. Storage and computing of NGS grapevine data

b. Government Furnished Property. Computer to access stored server data.

c. Utilities. Not Applicable.

d. Delivery. The Contractor shall deliver the servers within sixty (60) days after the receipt of the purchase order to:

Cornell University Jarek Pillardy Rhodes Hall,136 Hoy Rd, RM 623

ITHACA NY 14853

UNITED STATES

Phone # (607)254-6333.

e. Installation and Start-up. Not applicable.

V. Training and Documentation – Not Applicable

VI. Warranty. 3 years of hardware coverage, plus technical support from a hardware engineer, 24 Hour Cross ship including 2-way shipping coverage.

http://www.section508.gov/