Attachment B -SOW.docx

DOCX document 24 KB Posted

Attached to
6550--Reagents and consumables Federal contract opportunity
Solicitation number
36C26225Q0514
Issued by
Department of Veterans Affairs Veterans Health Administration Veterans Integrated Service Network 22

About this file

This Statement of Work outlines requirements for reagents and consumables compatible with Ion Torrent S5, Ion Torrent Chef System, and Ion Torrent Genexus systems for DNA and RNA Myeloid testing and DNA Solid Tumor testing at the VA Greater Los Angeles Healthcare System (VAGLAHS). The work involves supplying 26 specific products including assay kits, chips, pipette tips, plates, and quality control materials to support testing of 33 Myeloid genes and 34 Solid Tumor genes.

The services will be provided to VAGLAHS at 11301 Wilshire Blvd, CA 90073, which serves as a reference lab for VISN 22 molecular oncology testing. While normal operating hours are 7:30 AM to 5:00 PM Monday through Friday, the service operates 24/7 and vendors may need to work outside standard hours. The contractor must meet VA information security requirements and personnel must undergo background investigations through the VA Security and Investigations Center.

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Statement of Work- Greater Los Angeles Healthcare System Reagents & Supplies

1. Introduction

The purpose of this Statement of Work (SOW) is to outline the tasks and responsibilities of the successful offeror in relation to the VA Greater Los Angeles Healthcare System for next generation sequence testing.

1.1 Background

The VAGLAHS at 11301 Wilshire Blvd, CA 90073 is part of the Desert Pacific Healthcare Network (VISN 22), and is one of the most diversified tertiary health care providers in the VA. It is a teaching hospital, providing a full range of patient services, with state-of-the art technology as well as education and research. It also boosts one of the largest and most diverse patient populations in the VA system.

The section has become a reference lab for other facilities within VISN 22 for molecular oncology testing. It would be utilized as needed, based on the samples sent to the department for testing.

2. Scope

Obtain reagents and consumables that are compatible with Ion Torrent S5, Ion Torrent Chef System and Ion Torrent Genexus for the performance of DNA and RNA Myeloid testing and DNA Solid Tumor testing.

Must include the following Genes:

Myeloid Gene Identification: ABL1 BRAF CBL CSF3R DNMT3A FLT3 GATA2 IDH1 IDH2 JAK2 KIT KRAS MPL MYD88 NPM1 NRAS PTPN11 SETBP1 SF3B1 SRSF2 U2AF1 WT1 ASXL1 BCOR CALR CEBPA ETV6 EZH2 PHF6 RUNX1 STAG2 TET2 TP53 ZRSR2 SMC1A

Solid Tumor Gene Identification: AKT1 ALK AR BRAF CDK4 CTNNB1 DDR2 EGFR ERBB2 ERBB3 ERBB4 ESR1 FGFR2 FGFR3 GNA11 GNAQ HRAS IDH1 IDH2 JAK1 JAK2 JAK3 KIT KRAS MAP2K1 MAP2K2 MET MTOR NRAS PDGFRA PIK3CA RAF1 RET ROS1 SMO

Products Required to meet these needs:

Item #
Description/Part Number*
Product Number
1
ONCOMINE MYELOID CHF DNA ASSAY
NC1528823
2
ONCOMINE FOCUS CHEF READY
NC1595970
3
ONCOMINE MYELOID ASSAY
NC2045358
4
ONCOMINE PRECISION ASSAY GX CO
A46291
5
ONC MYELOID DNA ASSAY GX V2 32
NC2051349
6
ONC MYELOID RNA ASSAY GX V2
NC2676580
7
GENEXUS PIPETTE TIPS 12 RACK/9
A40266
8
96-WELL HARD SHELL PLATE CLEAR
4483354
9
ION GX5 CHIP AND GXS COUPLER K
A40269
10
GENEXUS SEQUENCING KIT COMBO
A40271
11
GXS TEMPL STRIPS 3-GX5 AND 4 C
A40263
12
GENEXUS BARCODES 1-32 HD KIT
A40261
13
GENEXUS STRIPS 3B-GX5
NC2045359
14
GENEXUS BARCODES 1-96 AS COMBO
A40257
15
ION 530 CHIP KIT
A27764
16
ION 510 ION 520 ION 530 KT
NC1364650
17
ADHSV FL SEAL PCR MICRPT 100EA
AB0626
18
ION 520 CHIP KIT
A27762
19
QUBIT DSDNA HS ASSAY KIT 500
Q32854
20
QUBIT RNA HS ASSAY KIT 500
Q32855
21
SERASEQ MYELOID MUTATION DNA
NC1600058
22
SERASEQ TUMOR DNA MIX V2 AF7
NC1784980
23
SERASEQ FUSION RNA MIX V4
NC1778303
24
SERASEQ NTRK FUSION RNA MIX
NC2749767
25
QUBIT ASSAY TUBES SET OF 500
Q32856
26
EP LOBND GNOMC TB 1.5ML 250/PK
13698791

3. Hours of Operation

· Normal tour-of-duty hours at VAGLAHS is 7:30 am to 5:00 pm, Monday through Friday, excluding Federal holidays. However, the service is operating 24/7 and as such there may be instances in which the vendor’s workday may be outside of this period. The vendor is required to coordinate these times with the designated Program Manager.

· In accordance with 5 U.S.C. 6103, Executive Order 11582 and Public Law 94-97 the following national holidays are observed and for the purpose of this contract are defined as “Legal Federal official holidays”

New Year’s Day
January 1st
Martin Luther King’s Birthday
Third Monday in January
President’s Day
Last Monday in January
Memorial Day
Last Monday in January
Juneteenth
June 19th
Independence Day
July 4th
Labor Day
First Monday in September
Columbus Day
Second Monday in October
Veteran’s Day
November 11th
Thanksgiving Day
Fourth Thursday in November
Christmas Day
December 25th

When a holiday falls on a Sunday, the following Monday will be observed as a National Holiday. When a holiday falls on a Saturday, the preceding Friday is observed as a National Holiday by U.S. Government Agencies.

4. Security

4.1 Information Security

· The vendor shall ensure adequate LAN/Internet, data, information, and system security in accordance with VA standard operating procedures and standard contract language, conditions laws, and regulations. The vendor’s firewall and web server shall meet or exceed the government minimum requirements for security. All government data shall be protected behind an approved firewall. Any security violations or attempted violations shall be reported to the VA Project Manager and the VBA Headquarters Information Security Officer as soon as possible. The vendor shall follow all applicable VA policies and procedures governing information security, especially those that pertain to certification accreditation.

(a) The contractor and their personnel shall be subject to the same Federal laws, regulations, standards and VA policies as VA personnel, regarding information and information system security. These include, but are not limited to Federal Information Security Management Act (FISMA), Appendix III of OMB Circular A-130, and guidance and standards, available from the Department of Commerce's National Institute of Standards and Technology (NIST). This also includes the use of common security configurations available from NIST's Web site at: http://checklists.nist.gov

(b) To ensure that appropriate security controls are in place, Contractors must follow the procedures set forth in "VA Information and Information System Security/Privacy Requirements for IT Contracts" located at the following Web site: http://www.iprm.oit.va.gov

4.2 Contract Personnel Security

All contractor employees who require access to the Department of Veterans Affairs' computer systems shall be the subject of a background investigation and must receive a favorable adjudication from the VA Security and Investigations Center (07C). The level of background security investigation will be in accordance with VA Directive 0710 dated September 10, 2004 and is available at: http://www.va.gov/pubs/asp/edsdirec.asp (VA Handbook 0710, Appendix A, Tables 1 - 3). Appropriate Background Investigation (BI) forms will be provided upon contract (or task order) award, and are to be completed and returned to the VA Security and Investigations Center (07C) within 30 days for processing. Contractors will be notified by 07C when the BI has been completed and adjudicated. These requirements are applicable to all subcontractor personnel requiring the same access. If the security clearance investigation is not completed prior to the start date of the contract, the employee may work on the contract while the security clearance is being processed, but the contractor will be responsible for the actions of those individuals they provide to perform work for the VA. In the event that damage arises from work performed by contractor personnel, under the auspices of the contract, the contractor will be responsible for resources necessary to remedy the incident.

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