All_inclusive_protein_modeling_software_specifications_08262019.docx

All-inclusive protein modeling software program the software will be used with general available bioinformatics software including, but not limited to: PubMed, NCBI BLAST, RCSB PDB, and Clustal Omega that are commonly utilized for procedures related to experimentation pertinent to protein, antibody, and allergen modeling.

The following item with noted capabilities below is required for procurement:

· Licensing for at least one year of software access

· Complete training in software use

· Customization and collaboration capabilities

· Unlimited software support and services for one year

· Active site visualization

· Protein Ligand Interaction Fingerprints and epitope prediction

· Ligand modification/optimization

· Virtual library enumeration

· Descriptor calculations

· Small molecule alignments, solvent and conformational analysis

· Protein, allergen, and antibody modeling

· Disulfide and alanine scanning for mutational analysis

· Protein-protein and protein-peptide docking

· Molecular simulations and quantum calculations Vendor to also guarantee the following services / considerations:

· Ensure software compatibility with existing SRRC software, virus protection, computer safety and operating systems

· Service agreement with term of not less than 12 months will be provided and guaranteed on-site technician response within 48 hours of any service request